Publications
For details about citations etc, please see my Google Scholar page.
2023
28. Nicholas M Fountain-Jones, Tatiana Giraud, Lucie Zinger, Holly Bik, Simon Creer, Elin Videvall. (2023) Molecular ecology of microbiomes in the wild: common pitfalls, methodological advances and future directions. Molecular Ecology.
27. Elin Videvall, Hanna M Bensch, Anel Engelbrecht, Schalk Cloete, Charlie K Cornwallis. (2023) Coprophagy rapidly matures juvenile gut microbiota in a precocial bird. Evolution Letters.
26. Elin Videvall, Pablo Burraco, German Orizaola. (2023) Impact of ionizing radiation on the environmental microbiomes of Chornobyl wetlands. Environmental Pollution.
2022
25. Kristina L Paxton, Loren Cassin-Sackett, Carter T Atkinson, Elin Videvall, Michael G Campana, Robert C Fleischer. (2023) Gene expression reveals immune response strategies of naïve Hawaiian honeycreepers experimentally infected with introduced avian malaria. Journal of Heredity.
24. Amanda K Navine, Kristina L Paxton, Eben H Paxton, Patrick J Hart, Jeffrey T Foster, Nancy McInerney, Robert C Fleischer, Elin Videvall. (2022) Microbiomes associated with avian malaria survival differ between susceptible Hawaiian honeycreepers and sympatric malaria-resistant introduced birds. Molecular Ecology.
23. Francisco C Ferreira, Elin Videvall, Christa M Seidl, Nicole E Wagner, A Marm Kilpatrick, Robert C Fleischer, Dina M Fonseca. (2022) Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum. Malaria Journal.
2021
22. Matthieu Leray, Laetitia GE Wilkins, Amy Apprill, Holly M Bik, Friederike K Clever, Marina E De León, Sean R Connolly, J Emmett Duffy, Leïla Ezzat, Sarah Gignoux-Wolfsohn, Edward Allen Herre, Jonathan Z Kaye, David I Kline, Jordan G Kueneman, Melissa K McCormick, W Owen McMillan, Aaron O’Dea, Tiago J Pereira, Jillian M Petersen, Daniel F Petticord, Mark E Torchin, Rebecca Vega Thurber, Elin Videvall*, William T Wcislo, Benedict Yuen, Jonathan A Eisen. (2021) Natural experiments in the sea as observatories of host-microbe ecology and evolution. PLOS Biology.
(*alphabetical middle author order)
21. Elin Videvall, Kristina L Paxton, Michael G Campana, Loren Cassin-Sackett, Carter T Atkinson, Robert C Fleischer. (2021) Transcriptome assembly and differential gene expression of the invasive avian malaria parasite Plasmodium relictum in Hawaiʻi. Ecology & Evolution.
20. Elin Videvall, Alfonso Marzal, Sergio Magallanes, Robert C Fleischer, Kathya Espinoza, Luz García-Longoria. (2021) The uropygial gland microbiome of house sparrows with malaria infection. Journal of Avian Biology.
2020
19. Elin Videvall, Se Jin Song, Hanna M Bensch, Maria Strandh, Anel Engelbrecht, Naomi Serfontein, Olof Hellgren, Adriaan Olivier, Schalk Cloete, Rob Knight, Charlie K Cornwallis. (2020) Early-life gut dysbiosis linked to juvenile mortality in ostriches. Microbiome.
18. Elin Videvall. (2020) Microbiome maturation during a unique developmental window. Molecular Ecology.
17. Elin Videvall, Vaidas Palinauskas, Gediminas Valkiūnas, Olof Hellgren. (2020) Host transcriptional responses to high- and low-virulent avian malaria parasites. The American Naturalist.
2019
16. Kathrin Näpflin, Lutz Becks, Staffan Bensch, Vincenzo A Ellis, Nina Hafer-Hahmann, Karin C Harding, Sara K Lindén, Emily A O'Connor, Morten T Olsen, Jacob Roved, Timothy B Sackton, Allison J Shultz, Vignesh Venkatakrishnan, Elin Videvall*, Helena Westerdahl, Jamie C Winternitz, Scott V Edwards (2019) Genomics of hosts-pathogen interactions: challenges and opportunities across ecological and spatiotemporal scales. PeerJ. (*alphabetical middle author order)
15. Elin Videvall, Se Jin Song, Hanna M Bensch, Maria Strandh, Anel Engelbrecht, Naomi Serfontein, Olof Hellgren, Adriaan Olivier, Schalk Cloete, Rob Knight, Charlie K Cornwallis. (2019) Major shifts in gut microbiota during development and its relationship to growth in ostriches. Molecular Ecology.
14. Elin Videvall. (2019) Genomic Advances in Avian Malaria Research. Trends in Parasitology.
2018
13. Hanna Sigeman, Suvi Ponnikas, Elin Videvall, Hongkai Zhang, Pallavi Chauhan, Sara Naurin, Bengt Hansson. (2018) Insights into Avian Incomplete Dosage Compensation: Sex-Biased Gene Expression Coevolves with Sex Chromosome Degeneration in the Common Whitethroat. Genes.
12. Elin Videvall. (2018) Plasmodium parasites of birds have the most AT-rich genes of eukaryotes. Microbial Genomics.
11. Elin Videvall, Maria Strandh, Anel Engelbrecht, Schalk Cloete, Charlie K Cornwallis. (2018) Measuring the gut microbiome in birds: comparison of faecal and cloacal sampling. Molecular Ecology Resources.
10. Olof Hellgren, Staffan Bensch, Elin Videvall. (2018) De-novo synthesis of thiamine (vitamin B1) is the ancestral state in Plasmodium parasites - evidence from avian haemosporidians. Parasitology.
2017
9. Elin Videvall, Maria Strandh, Anel Engelbrecht, Schalk Cloete, Charlie K Cornwallis. (2017) Direct PCR offers a fast and reliable alternative to conventional DNA isolation methods for gut microbiomes. mSystems.
8. Elin Videvall, Charlie K Cornwallis, Dag Ahrén, Vaidas Palinauskas, Gediminas Valkiūnas, Olof Hellgren. (2017) The transcriptome of the avian malaria parasite Plasmodium ashfordi displays host-specific gene expression. Molecular Ecology.
7. Hannah Watson, Elin Videvall, Martin N Andersson, Caroline Isaksson. (2017) Transcriptome analysis of a wild bird reveals physiological responses to the urban environment. Scientific Reports.
2016
6. Staffan Bensch, Björn Canbäck, Jeremy D DeBarry, Tomas Johansson, Olof Hellgren, Jessica C Kissinger, Vaidas Palinauskas, Elin Videvall, Gediminas Valkiūnas. (2016) The genome of Haemoproteus tartakovskyi and its relationship to human malaria parasites. Genome Biology and Evolution.
5. Elin Videvall, Erik Öckinger, Lars B Pettersson. (2016) Butterfly monitoring using systematically placed transects in contrasting climatic regions – exploring an established spatial design for sampling. Nature Conservation.
4. Elin Videvall, Nina Sletvold, Jenny Hagenblad, Jon Ågren, Bengt Hansson. (2016) Strong maternal effects on gene expression in Arabidopsis lyrata hybrids. Molecular Biology and Evolution.
2013 – 2015
3. Elin Videvall, Charlie K Cornwallis, Vaidas Palinauskas, Gediminas Valkiūnas, Olof Hellgren. (2015) The Avian Transcriptome Response to Malaria Infection. Molecular Biology and Evolution.
2. Martin N Andersson, Elin Videvall, Kimberly KO Walden, Marion O Harris, Hugh M Robertson, Christer Löfstedt. (2014) Sex- and tissue-specific profiles of chemosensory gene expression in a herbivorous gall-inducing fly (Diptera: Cecidomyiidae). BMC Genomics.
1. Elin Videvall, Staffan Bensch, Mats Ander, Jan Chirico, Roland Sigvald, Rickard Ignell. (2013) Molecular identification of bloodmeals and species composition in Culicoides biting midges. Medical and Veterinary Entomology.
Publications (non-peer-reviewed)
3. Florent Mazel, Sarah C. L. Knowles, Elin Videvall, Amy R Sweeny. (2023). Evolutionary patterns and processes in animal microbiomes. Journal of Evolutionary Biology.
2. Elin Videvall. (2022) Personalized microbiomes in social baboons. Nature Ecology & Evolution.
1. Emily Marden, Richard J. Abbott, Frédéric Austerlitz, Daniel Ortiz‐Barrientos, Regina S. Baucom, Pim Bongaerts, Aurélie Bonin, Camille Bonneaud, Luke Browne, C. Alex Buerkle, Ana L. Caicedo, David W. Coltman, Mitchell B. Cruzan, Angus Davison, J. Andrew DeWoody, Alex J. Dumbrell, Brent C. Emerson, Nicholas M. Fountain‐Jones, Rosemary Gillespie, Tatiana Giraud, Michael M. Hansen, Kathryn A. Hodgins, Myriam Heuertz, Shotaro Hirase, Rebecca Hooper, Paul Hohenlohe, Nolan C. Kane, Joanna L. Kelley, Andrew P. Kinziger, Valerie J. McKenzie, Corrie S. Moreau, Alison G. Nazareno, Tara A. Pelletier, Josephine M. Pemberton, Yanhua Qu, Sébastien Renaut, Cynthia Riginos, Naiara Rodríguez‐Ezpeleta, Sean M. Rogers, Jacob A. Russell, Sean D. Schoville, Suhua Shi, Megan Smith, Victoria L. Sork, Graham N. Stone, Pierre Taberlet, Elin Videvall*, Lisette Waits, Emily Warschefsky, Robert K. Wayne, Annabel Whibley, Janna Willoughby, Jeremy B. Yoder, Lucie Zinger, Benjamin Sibbett, Shawn Narum, Loren H. Rieseberg. (2020) Sharing and reporting benefits from biodiversity research. Molecular Ecology.
(*alphabetical middle author order)
Presentations
Short summary: 19 invited talks/seminars, 20 contributed presentations.
Below are the most recent talks
2023 - Invited symposium talk - European Ornithological Union Congress, Lund University, Sweden.
2022 - Contributed talk – Wildlife Malaria conference, Bielefeld University, Germany, virtual
2022 - Invited seminar - Institute of Avian Research, Wilhelmshaven, Germany, virtual.
2022 - Contributed talk – Revolution conference, Uppsala University, Sweden, virtual
2021 - Contributed talk - Animal Microbiome Research Group, virtual.
2021 - Invited talk – American Ornithological Society (AOS) and the Society of Canadian Ornithologists Conference (SCO-SOC) joint Conference, USA, virtual.
2021 - Invited keynote - The 9th Conference of the Scandinavian-Baltic Society for Parasitology (CSBSP9), Vilnius, Lithuania, virtual
2021 - Invited talk - Smithsonian Conservation Biology Institute Cross-Center Seminar, USA, virtual
2021 - Contributed talk - Revolution conference, Uppsala University, Sweden, virtual
2021 - Invited talk - Virtual Genomics Hour, California Academy of Sciences, USA, virtual
Photo: Inger Ekström
